Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Sox2P48432 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Gm13168-201ENSMUST00000121771 632 ntBASIC14.9□□□□□ -0.02
Sox2P48432 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.9□□□□□ -0.02
Sox2P48432 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.9□□□□□ -0.02
Sox2P48432 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Sox2P48432 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sox2P48432 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox2P48432 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.9□□□□□ -0.02
Sox2P48432 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox2P48432 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sox2P48432 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox2P48432 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox2P48432 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox2P48432 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox2P48432 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sox2P48432 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Sox2P48432 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox2P48432 Gm11336-201ENSMUST00000118168 334 ntBASIC14.88□□□□□ -0.03
Sox2P48432 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox2P48432 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Gm20760-201ENSMUST00000179197 648 ntBASIC14.88□□□□□ -0.03
Sox2P48432 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Gm21814-202ENSMUST00000203277 873 ntBASIC14.88□□□□□ -0.03
Sox2P48432 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox2P48432 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox2P48432 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox2P48432 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Sox2P48432 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox2P48432 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox2P48432 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox2P48432 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox2P48432 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sox2P48432 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox2P48432 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.87□□□□□ -0.03
Sox2P48432 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.87□□□□□ -0.03
Sox2P48432 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sox2P48432 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox2P48432 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms