Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.18□□□□□ -0.3
Abca1P41233 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Gm6089-201ENSMUST00000197666 938 ntBASIC13.18□□□□□ -0.3
Abca1P41233 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.18□□□□□ -0.3
Abca1P41233 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Gm10175-201ENSMUST00000086013 645 ntBASIC13.18□□□□□ -0.3
Abca1P41233 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Abca1P41233 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Abca1P41233 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Abca1P41233 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.17□□□□□ -0.3
Abca1P41233 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.17□□□□□ -0.3
Abca1P41233 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.17□□□□□ -0.3
Abca1P41233 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Abca1P41233 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Abca1P41233 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.17□□□□□ -0.3
Abca1P41233 Gm25911-201ENSMUST00000157621 56 ntBASIC13.16□□□□□ -0.3
Abca1P41233 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.16□□□□□ -0.3
Abca1P41233 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.16□□□□□ -0.3
Abca1P41233 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Abca1P41233 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.16□□□□□ -0.3
Abca1P41233 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.16□□□□□ -0.3
Abca1P41233 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.16□□□□□ -0.3
Abca1P41233 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Abca1P41233 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Abca1P41233 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Abca1P41233 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 AV026068-213ENSMUST00000223675 1171 ntBASIC13.15□□□□□ -0.3
Abca1P41233 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Gm13418-201ENSMUST00000119097 944 ntBASIC13.15□□□□□ -0.3
Abca1P41233 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.15□□□□□ -0.3
Abca1P41233 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.15□□□□□ -0.3
Abca1P41233 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Abca1P41233 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.15□□□□□ -0.3
Abca1P41233 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Abca1P41233 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms