Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sox5P35710 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.34■□□□□ 0.37
Sox5P35710 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Gm7729-201ENSMUST00000050143 801 ntBASIC17.34■□□□□ 0.37
Sox5P35710 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Sox5P35710 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox5P35710 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sox5P35710 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Sox5P35710 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Gm27389-201ENSMUST00000183622 195 ntBASIC17.33■□□□□ 0.36
Sox5P35710 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.33■□□□□ 0.36
Sox5P35710 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.33■□□□□ 0.36
Sox5P35710 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.33■□□□□ 0.36
Sox5P35710 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.33■□□□□ 0.36
Sox5P35710 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox5P35710 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.32■□□□□ 0.36
Sox5P35710 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.32■□□□□ 0.36
Sox5P35710 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Sox5P35710 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.32■□□□□ 0.36
Sox5P35710 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox5P35710 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sox5P35710 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox5P35710 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox5P35710 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.31■□□□□ 0.36
Sox5P35710 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sox5P35710 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox5P35710 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sox5P35710 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox5P35710 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.31■□□□□ 0.36
Sox5P35710 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sox5P35710 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sox5P35710 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.3■□□□□ 0.36
Sox5P35710 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.3■□□□□ 0.36
Sox5P35710 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.3■□□□□ 0.36
Sox5P35710 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Sox5P35710 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox5P35710 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox5P35710 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox5P35710 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms