Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc6a11P31650 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.06■□□□□ 0
Slc6a11P31650 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.06■□□□□ 0
Slc6a11P31650 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.06■□□□□ 0
Slc6a11P31650 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Slc6a11P31650 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.06■□□□□ 0
Slc6a11P31650 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc6a11P31650 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.06■□□□□ 0
Slc6a11P31650 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Slc6a11P31650 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.05■□□□□ 0
Slc6a11P31650 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Slc6a11P31650 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Slc6a11P31650 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.05■□□□□ -0
Slc6a11P31650 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.05■□□□□ -0
Slc6a11P31650 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.05■□□□□ -0
Slc6a11P31650 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Gm27357-201ENSMUST00000183754 135 ntBASIC15.05■□□□□ -0
Slc6a11P31650 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.05■□□□□ -0
Slc6a11P31650 Gm43514-201ENSMUST00000198852 424 ntBASIC15.05■□□□□ -0
Slc6a11P31650 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.05■□□□□ -0
Slc6a11P31650 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.05■□□□□ -0
Slc6a11P31650 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.05■□□□□ -0
Slc6a11P31650 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.05■□□□□ -0
Slc6a11P31650 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Slc6a11P31650 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Slc6a11P31650 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Slc6a11P31650 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.04■□□□□ -0
Slc6a11P31650 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.04■□□□□ -0
Slc6a11P31650 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Gm24589-201ENSMUST00000116692 94 ntBASIC15.04■□□□□ -0
Slc6a11P31650 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.04■□□□□ -0
Slc6a11P31650 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.04■□□□□ -0
Slc6a11P31650 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Slc6a11P31650 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.04■□□□□ -0
Slc6a11P31650 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.03■□□□□ -0
Slc6a11P31650 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Slc6a11P31650 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Slc6a11P31650 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Slc6a11P31650 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Slc6a11P31650 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms