Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Mmp3P28862 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.95■□□□□ 0.3
Mmp3P28862 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.94■□□□□ 0.3
Mmp3P28862 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.94■□□□□ 0.3
Mmp3P28862 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp3P28862 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.94■□□□□ 0.3
Mmp3P28862 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.94■□□□□ 0.3
Mmp3P28862 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.94■□□□□ 0.3
Mmp3P28862 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Mmp3P28862 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Mmp3P28862 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp3P28862 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.93■□□□□ 0.3
Mmp3P28862 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Mmp3P28862 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.93■□□□□ 0.3
Mmp3P28862 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Gm27702-201ENSMUST00000184512 56 ntBASIC16.93■□□□□ 0.3
Mmp3P28862 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.93■□□□□ 0.3
Mmp3P28862 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Mmp3P28862 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Mmp3P28862 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.92■□□□□ 0.3
Mmp3P28862 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.92■□□□□ 0.3
Mmp3P28862 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.92■□□□□ 0.3
Mmp3P28862 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.92■□□□□ 0.3
Mmp3P28862 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Mmp3P28862 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.92■□□□□ 0.3
Mmp3P28862 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Gm27300-201ENSMUST00000184085 97 ntBASIC16.91■□□□□ 0.3
Mmp3P28862 Gm27335-201ENSMUST00000184758 97 ntBASIC16.91■□□□□ 0.3
Mmp3P28862 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.91■□□□□ 0.3
Mmp3P28862 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp3P28862 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.91■□□□□ 0.3
Mmp3P28862 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Mmp3P28862 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp3P28862 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.91■□□□□ 0.3
Mmp3P28862 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Mmp3P28862 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.9■□□□□ 0.3
Mmp3P28862 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Mmp3P28862 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Mmp3P28862 Gm9682-201ENSMUST00000197505 556 ntBASIC16.9■□□□□ 0.3
Mmp3P28862 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms