Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Col4a1P02463 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Gm27321-201ENSMUST00000185021 205 ntBASIC19.34■□□□□ 0.69
Col4a1P02463 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col4a1P02463 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.34■□□□□ 0.69
Col4a1P02463 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.34■□□□□ 0.69
Col4a1P02463 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.34■□□□□ 0.69
Col4a1P02463 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col4a1P02463 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col4a1P02463 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col4a1P02463 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col4a1P02463 Gm15920-201ENSMUST00000118998 402 ntBASIC19.33■□□□□ 0.69
Col4a1P02463 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.33■□□□□ 0.69
Col4a1P02463 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a1P02463 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a1P02463 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.33■□□□□ 0.69
Col4a1P02463 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a1P02463 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col4a1P02463 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a1P02463 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col4a1P02463 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.33■□□□□ 0.68
Col4a1P02463 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.33■□□□□ 0.68
Col4a1P02463 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.33■□□□□ 0.68
Col4a1P02463 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.33■□□□□ 0.68
Col4a1P02463 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col4a1P02463 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Col4a1P02463 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
Col4a1P02463 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Col4a1P02463 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.32■□□□□ 0.68
Col4a1P02463 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Gm18889-201ENSMUST00000174284 929 ntBASIC19.32■□□□□ 0.68
Col4a1P02463 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col4a1P02463 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col4a1P02463 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col4a1P02463 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.31■□□□□ 0.68
Col4a1P02463 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.31■□□□□ 0.68
Col4a1P02463 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.31■□□□□ 0.68
Col4a1P02463 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col4a1P02463 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col4a1P02463 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.31■□□□□ 0.68
Col4a1P02463 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 AA543401-201ENSMUST00000164248 1269 ntBASIC19.3■□□□□ 0.68
Col4a1P02463 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.3■□□□□ 0.68
Col4a1P02463 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.3■□□□□ 0.68
Col4a1P02463 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col4a1P02463 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.3■□□□□ 0.68
Col4a1P02463 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.3■□□□□ 0.68
Col4a1P02463 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Col4a1P02463 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.3■□□□□ 0.68
Col4a1P02463 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.3■□□□□ 0.68
Col4a1P02463 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col4a1P02463 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col4a1P02463 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Col4a1P02463 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col4a1P02463 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms