Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pfdn2O70591 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pfdn2O70591 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pfdn2O70591 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.25□□□□□ -0.29
Pfdn2O70591 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.25□□□□□ -0.29
Pfdn2O70591 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.25□□□□□ -0.29
Pfdn2O70591 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pfdn2O70591 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.24□□□□□ -0.29
Pfdn2O70591 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.24□□□□□ -0.29
Pfdn2O70591 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Gm43183-201ENSMUST00000200632 547 ntBASIC13.24□□□□□ -0.29
Pfdn2O70591 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.24□□□□□ -0.29
Pfdn2O70591 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Pfdn2O70591 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pfdn2O70591 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.23□□□□□ -0.29
Pfdn2O70591 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pfdn2O70591 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pfdn2O70591 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.23□□□□□ -0.29
Pfdn2O70591 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.23□□□□□ -0.29
Pfdn2O70591 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.23□□□□□ -0.29
Pfdn2O70591 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pfdn2O70591 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.23□□□□□ -0.29
Pfdn2O70591 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.23□□□□□ -0.29
Pfdn2O70591 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pfdn2O70591 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.22□□□□□ -0.29
Pfdn2O70591 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.22□□□□□ -0.29
Pfdn2O70591 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.22□□□□□ -0.29
Pfdn2O70591 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.22□□□□□ -0.29
Pfdn2O70591 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pfdn2O70591 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pfdn2O70591 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms