Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Alx4O35137 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Alx4O35137 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Alx4O35137 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.15□□□□□ -0.14
Alx4O35137 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Alx4O35137 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Alx4O35137 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Alx4O35137 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Alx4O35137 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Alx4O35137 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.15□□□□□ -0.14
Alx4O35137 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Alx4O35137 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.15□□□□□ -0.14
Alx4O35137 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Alx4O35137 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Alx4O35137 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Alx4O35137 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Alx4O35137 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Alx4O35137 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Alx4O35137 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.14□□□□□ -0.15
Alx4O35137 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.14□□□□□ -0.15
Alx4O35137 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.14□□□□□ -0.15
Alx4O35137 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Alx4O35137 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.14□□□□□ -0.15
Alx4O35137 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.14□□□□□ -0.15
Alx4O35137 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Alx4O35137 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.14□□□□□ -0.15
Alx4O35137 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Alx4O35137 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Alx4O35137 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Mir6404-201ENSMUST00000183699 94 ntBASIC14.13□□□□□ -0.15
Alx4O35137 Gm44430-201ENSMUST00000203376 995 ntBASIC14.13□□□□□ -0.15
Alx4O35137 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Alx4O35137 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Alx4O35137 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Alx4O35137 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Alx4O35137 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.13□□□□□ -0.15
Alx4O35137 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Alx4O35137 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Alx4O35137 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms