Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Mir6404-201ENSMUST00000183699 94 ntBASIC16.29■□□□□ 0.2
Atf6F6VAN0 Gm27742-201ENSMUST00000184667 60 ntBASIC16.29■□□□□ 0.2
Atf6F6VAN0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atf6F6VAN0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Olfr129-201ENSMUST00000122318 993 ntBASIC16.28■□□□□ 0.2
Atf6F6VAN0 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.28■□□□□ 0.2
Atf6F6VAN0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.28■□□□□ 0.2
Atf6F6VAN0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.28■□□□□ 0.2
Atf6F6VAN0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.28■□□□□ 0.2
Atf6F6VAN0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atf6F6VAN0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Gm13312-201ENSMUST00000119631 718 ntBASIC16.27■□□□□ 0.2
Atf6F6VAN0 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.27■□□□□ 0.2
Atf6F6VAN0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atf6F6VAN0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atf6F6VAN0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Atf6F6VAN0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Gm7284-201ENSMUST00000131667 944 ntBASIC16.26■□□□□ 0.19
Atf6F6VAN0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atf6F6VAN0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Atf6F6VAN0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms