Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb9E9Q5G2 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Gm18733-201ENSMUST00000173950 856 ntBASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdhb9E9Q5G2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Gm15173-201ENSMUST00000122049 433 ntBASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb9E9Q5G2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gm15358-201ENSMUST00000119249 520 ntBASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gm12350-201ENSMUST00000121208 462 ntBASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gm44771-201ENSMUST00000206975 626 ntBASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gm19164-201ENSMUST00000210667 640 ntBASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb9E9Q5G2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Gm6550-201ENSMUST00000187574 993 ntBASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb9E9Q5G2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb9E9Q5G2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms