Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.2■□□□□ 0.18
Col4a6B1AVK5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col4a6B1AVK5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gm18057-201ENSMUST00000208220 503 ntBASIC16.18■□□□□ 0.18
Col4a6B1AVK5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.18■□□□□ 0.18
Col4a6B1AVK5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gm2272-201ENSMUST00000194903 582 ntBASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col4a6B1AVK5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.17■□□□□ 0.18
Col4a6B1AVK5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.17■□□□□ 0.18
Col4a6B1AVK5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col4a6B1AVK5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Gm6973-201ENSMUST00000117080 721 ntBASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col4a6B1AVK5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms