Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11127A7VMS2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11127A7VMS2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11127A7VMS2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Gm11127A7VMS2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.08□□□□□ -0.15
Gm11127A7VMS2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Gm27463-201ENSMUST00000183569 57 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Gm5417-201ENSMUST00000079706 384 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.08□□□□□ -0.16
Gm11127A7VMS2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm11127A7VMS2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.07□□□□□ -0.16
Gm11127A7VMS2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Gm11127A7VMS2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Gm21814-202ENSMUST00000203277 873 ntBASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm11127A7VMS2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm11127A7VMS2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm11127A7VMS2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm11127A7VMS2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms