Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.8□□□□□ -0.36
Chd6A3KFM7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Gm14767-201ENSMUST00000121559 586 ntBASIC12.8□□□□□ -0.36
Chd6A3KFM7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Gm27838-201ENSMUST00000184829 128 ntBASIC12.8□□□□□ -0.36
Chd6A3KFM7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.8□□□□□ -0.36
Chd6A3KFM7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.79□□□□□ -0.36
Chd6A3KFM7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Gm9682-201ENSMUST00000197505 556 ntBASIC12.79□□□□□ -0.36
Chd6A3KFM7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Rarb-207ENSMUST00000225921 2756 ntBASIC12.79□□□□□ -0.36
Chd6A3KFM7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Gm28630-201ENSMUST00000187806 498 ntBASIC12.79□□□□□ -0.36
Chd6A3KFM7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chd6A3KFM7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.79□□□□□ -0.36
Chd6A3KFM7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.78□□□□□ -0.36
Chd6A3KFM7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.78□□□□□ -0.36
Chd6A3KFM7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Chd6A3KFM7 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.77□□□□□ -0.36
Chd6A3KFM7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Chd6A3KFM7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms