Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-1A0N8R1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Gm7889-201ENSMUST00000185591 958 ntBASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-1A0N8R1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-1A0N8R1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav12-1A0N8R1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms