Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Igkv6-20A0A140T8P2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv6-20A0A140T8P2 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv6-20A0A140T8P2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm11594-201ENSMUST00000122313 162 ntBASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv6-20A0A140T8P2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms