Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Sybu-209ENSMUST00000228639 4113 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm18115-201ENSMUST00000221209 621 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav13n-4A0A0G2JG01 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Prob1-201ENSMUST00000097619 3021 ntBASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm28659-201ENSMUST00000188013 759 ntBASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav13n-4A0A0G2JG01 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms