Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm44450-201ENSMUST00000199528 114 ntBASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv3A0A0A6YYE2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv3A0A0A6YYE2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm26571-201ENSMUST00000181399 666 ntBASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.24□□□□□ -0.45
Trbv3A0A0A6YYE2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms