Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav12d-3A0A075B6A4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm7514-201ENSMUST00000209475 934 ntBASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav12d-3A0A075B6A4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm37025-201ENSMUST00000195159 829 ntBASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav12d-3A0A075B6A4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms