Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Gm10654-201ENSMUST00000098653 1633 ntBASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav12-3A0A075B648 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav12-3A0A075B648 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-3A0A075B648 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-3A0A075B648 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-3A0A075B648 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-3A0A075B648 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav12-3A0A075B648 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav12-3A0A075B648 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Gm8493-201ENSMUST00000196881 489 ntBASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav12-3A0A075B648 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms