Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav7n-4A0A075B620 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm37292-201ENSMUST00000192062 758 ntBASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm42642-201ENSMUST00000200683 355 ntBASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav7n-4A0A075B620 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Gm13148-201ENSMUST00000118892 745 ntBASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav7n-4A0A075B620 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms