Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ubl3Q9Z2M6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ubl3Q9Z2M6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Gm7284-201ENSMUST00000131667 944 ntBASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Gm27704-201ENSMUST00000185094 107 ntBASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Ubl3Q9Z2M6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ubl3Q9Z2M6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Ubl3Q9Z2M6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ubl3Q9Z2M6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms