Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gm44872-201ENSMUST00000207864 420 ntBASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col13a1Q9R1N9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm11780-201ENSMUST00000136880 516 ntBASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col13a1Q9R1N9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms