Protein–RNA interactions for Protein: Q9QYK7

Rnf11, RING finger protein 11, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf11Q9QYK7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rnf11Q9QYK7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf11Q9QYK7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf11Q9QYK7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Gm10052-201ENSMUST00000168019 960 ntBASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Gm7729-201ENSMUST00000050143 801 ntBASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf11Q9QYK7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf11Q9QYK7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Gm44430-201ENSMUST00000203376 995 ntBASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf11Q9QYK7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms