Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 IRX1P1-201ENST00000438849 1838 ntBASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.88
SLC52A1Q9NWF4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
SLC52A1Q9NWF4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 LINC01006-201ENST00000333319 2292 ntBASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 NUS1P2-201ENST00000417358 873 ntBASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 PMS2P1-201ENST00000431037 1228 ntBASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 AP001005.1-201ENST00000571755 1248 ntBASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC26.82■■□□□ 1.88
SLC52A1Q9NWF4 AC112907.3-201ENST00000577781 2400 ntBASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 MIR574-201ENST00000385209 96 ntBASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC26.81■■□□□ 1.88
SLC52A1Q9NWF4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 AC011840.4-201ENST00000578471 627 ntBASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 AL773604.1-201ENST00000617417 272 ntBASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 AF228730.7-201ENST00000641842 219 ntBASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
SLC52A1Q9NWF4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 BNIP3P18-201ENST00000593976 575 ntBASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 IL9RP2-201ENST00000423948 1312 ntBASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
SLC52A1Q9NWF4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 HES2-202ENST00000377836 507 ntTSL 2 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 MINOS1P3-201ENST00000457048 203 ntBASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SLC52A1Q9NWF4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 FP475955.4-201ENST00000623131 1990 ntBASIC26.77■■□□□ 1.88
SLC52A1Q9NWF4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
SLC52A1Q9NWF4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
SLC52A1Q9NWF4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
SLC52A1Q9NWF4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC26.76■■□□□ 1.87
SLC52A1Q9NWF4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms