Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sec61a2Q9JLR1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Gm6623-201ENSMUST00000173570 544 ntBASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sec61a2Q9JLR1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Sec61a2Q9JLR1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Gm7284-201ENSMUST00000131667 944 ntBASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sec61a2Q9JLR1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm11950-201ENSMUST00000121615 838 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm36967-201ENSMUST00000193814 266 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm21362-201ENSMUST00000194272 928 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gm10819-201ENSMUST00000099988 561 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sec61a2Q9JLR1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sec61a2Q9JLR1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms