Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.25■□□□□ 0.35
Ssr1Q9CY50 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Gm15565-201ENSMUST00000118890 427 ntBASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Mir6982-201ENSMUST00000184354 68 ntBASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ssr1Q9CY50 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Gm45058-201ENSMUST00000205810 766 ntBASIC17.23■□□□□ 0.35
Ssr1Q9CY50 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ssr1Q9CY50 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ssr1Q9CY50 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms