Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Gm44878-201ENSMUST00000205812 1295 ntBASIC18■□□□□ 0.47
Chd1lQ9CXF7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Chd1lQ9CXF7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Chd1lQ9CXF7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1lQ9CXF7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1lQ9CXF7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd1lQ9CXF7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms