Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim11Q99PQ2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Mir6404-201ENSMUST00000183699 94 ntBASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Gm17808-201ENSMUST00000200859 894 ntBASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trim11Q99PQ2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Mir7071-201ENSMUST00000184847 69 ntBASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Gm29518-201ENSMUST00000190858 372 ntBASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim11Q99PQ2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.1■□□□□ 0.49
Trim11Q99PQ2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim11Q99PQ2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 AA414768-201ENSMUST00000121924 1257 ntBASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Gm6659-201ENSMUST00000174752 547 ntBASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.09■□□□□ 0.49
Trim11Q99PQ2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 App-207ENSMUST00000227737 2827 ntBASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim11Q99PQ2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim11Q99PQ2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms