Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rtn4rQ99PI8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rtn4rQ99PI8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Gm12644-201ENSMUST00000119935 606 ntBASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Mir6404-201ENSMUST00000183699 94 ntBASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Gm27459-201ENSMUST00000184860 107 ntBASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Gm27741-201ENSMUST00000185060 237 ntBASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rtn4rQ99PI8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm7153-201ENSMUST00000117092 455 ntBASIC14□□□□□ -0.17
Rtn4rQ99PI8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm25745-201ENSMUST00000174945 133 ntBASIC14□□□□□ -0.17
Rtn4rQ99PI8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rtn4rQ99PI8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rtn4rQ99PI8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms