Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Odf3b-204ENSMUST00000227834 930 ntBASIC15.19■□□□□ 0.02
Nck1Q99M51 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.18■□□□□ 0.02
Nck1Q99M51 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nck1Q99M51 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.18■□□□□ 0.02
Nck1Q99M51 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.18■□□□□ 0.02
Nck1Q99M51 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.18■□□□□ 0.02
Nck1Q99M51 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nck1Q99M51 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nck1Q99M51 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nck1Q99M51 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Nck1Q99M51 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nck1Q99M51 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.17■□□□□ 0.02
Nck1Q99M51 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nck1Q99M51 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.17■□□□□ 0.02
Nck1Q99M51 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.17■□□□□ 0.02
Nck1Q99M51 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.17■□□□□ 0.02
Nck1Q99M51 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.17■□□□□ 0.02
Nck1Q99M51 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nck1Q99M51 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Gm10653-202ENSMUST00000139570 835 ntBASIC15.16■□□□□ 0.02
Nck1Q99M51 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Gm7370-201ENSMUST00000219471 767 ntBASIC15.16■□□□□ 0.02
Nck1Q99M51 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.16■□□□□ 0.02
Nck1Q99M51 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nck1Q99M51 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Nck1Q99M51 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms