Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk5rap3Q99LM2 Asic1-205ENSMUST00000228185 1818 ntBASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk5rap3Q99LM2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Gm44430-201ENSMUST00000203376 995 ntBASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk5rap3Q99LM2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Gm11355-201ENSMUST00000121120 306 ntBASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk5rap3Q99LM2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdk5rap3Q99LM2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cdk5rap3Q99LM2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.46■□□□□ 0.23
Cdk5rap3Q99LM2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms