Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Taf11Q99JX1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Taf11Q99JX1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.15■□□□□ 0.02
Taf11Q99JX1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Taf11Q99JX1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Gm6420-201ENSMUST00000193885 723 ntBASIC15.14■□□□□ 0.01
Taf11Q99JX1 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.14■□□□□ 0.01
Taf11Q99JX1 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.14■□□□□ 0.01
Taf11Q99JX1 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.14■□□□□ 0.01
Taf11Q99JX1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Taf11Q99JX1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Nespas-201ENSMUST00000143738 1083 ntBASIC15.13■□□□□ 0.01
Taf11Q99JX1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Gm7514-201ENSMUST00000209475 934 ntBASIC15.13■□□□□ 0.01
Taf11Q99JX1 Gm18671-201ENSMUST00000214826 683 ntBASIC15.13■□□□□ 0.01
Taf11Q99JX1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.13■□□□□ 0.01
Taf11Q99JX1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Taf11Q99JX1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Taf11Q99JX1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Taf11Q99JX1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms