Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.34■□□□□ 0.21
Hmgcll1Q8JZS7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcll1Q8JZS7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcll1Q8JZS7 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.34■□□□□ 0.21
Hmgcll1Q8JZS7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hmgcll1Q8JZS7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgcll1Q8JZS7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.33■□□□□ 0.21
Hmgcll1Q8JZS7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hmgcll1Q8JZS7 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Gm15358-201ENSMUST00000119249 520 ntBASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hmgcll1Q8JZS7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Gm5682-201ENSMUST00000173402 505 ntBASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Gm27628-201ENSMUST00000184911 107 ntBASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hmgcll1Q8JZS7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hmgcll1Q8JZS7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hmgcll1Q8JZS7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms