Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox30Q8CGW4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Gm9987-201ENSMUST00000069768 567 ntBASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sox30Q8CGW4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Gm43799-201ENSMUST00000201845 579 ntBASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sox30Q8CGW4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Sox30Q8CGW4 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.33■□□□□ 0.37
Sox30Q8CGW4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox30Q8CGW4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Sox30Q8CGW4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox30Q8CGW4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sox30Q8CGW4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sox30Q8CGW4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms