Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Haglr-201ENSMUST00000100000 2085 ntBASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm13036-201ENSMUST00000117799 748 ntBASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rdh1Q8CGV4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Gm5364-201ENSMUST00000216789 889 ntBASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rdh1Q8CGV4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rdh1Q8CGV4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms