Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lysmd4Q8CC84 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Gm10566-201ENSMUST00000086739 996 ntBASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lysmd4Q8CC84 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lysmd4Q8CC84 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Gm22240-201ENSMUST00000175225 82 ntBASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lysmd4Q8CC84 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms