Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc46a2Q8CA03 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Gm7370-201ENSMUST00000219471 767 ntBASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc46a2Q8CA03 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Gm21814-202ENSMUST00000203277 873 ntBASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc46a2Q8CA03 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm715-201ENSMUST00000117865 831 ntBASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm13836-201ENSMUST00000121159 501 ntBASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Slc46a2Q8CA03 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.27■□□□□ 0.03
Slc46a2Q8CA03 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms