Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trnp1Q80ZI1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trnp1Q80ZI1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Gm43438-201ENSMUST00000198133 379 ntBASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trnp1Q80ZI1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trnp1Q80ZI1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Gm24158-201ENSMUST00000175263 71 ntBASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trnp1Q80ZI1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm25287-201ENSMUST00000103846 110 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm22918-201ENSMUST00000103855 110 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm16198-201ENSMUST00000118766 670 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm27437-201ENSMUST00000183429 107 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trnp1Q80ZI1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.81■□□□□ 0.44
Trnp1Q80ZI1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms