Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Gm26039-201ENSMUST00000158152 144 ntBASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.69■□□□□ 0.42
Dhx40Q6PE54 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Dhx40Q6PE54 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Mir1668-201ENSMUST00000184114 107 ntBASIC17.67■□□□□ 0.42
Dhx40Q6PE54 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Dhx40Q6PE54 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Gm10231-201ENSMUST00000181584 441 ntBASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Gm7889-201ENSMUST00000185591 958 ntBASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Gm10175-202ENSMUST00000208752 441 ntBASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Dhx40Q6PE54 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Dhx40Q6PE54 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms