Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.83■□□□□ 0.44
Abcf1Q6P542 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcf1Q6P542 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 AA414768-201ENSMUST00000121924 1257 ntBASIC17.82■□□□□ 0.44
Abcf1Q6P542 Gm26039-201ENSMUST00000158152 144 ntBASIC17.82■□□□□ 0.44
Abcf1Q6P542 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.82■□□□□ 0.44
Abcf1Q6P542 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.82■□□□□ 0.44
Abcf1Q6P542 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcf1Q6P542 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.81■□□□□ 0.44
Abcf1Q6P542 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.81■□□□□ 0.44
Abcf1Q6P542 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Gm25016-201ENSMUST00000158399 131 ntBASIC17.81■□□□□ 0.44
Abcf1Q6P542 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Abcf1Q6P542 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Gm13186-201ENSMUST00000118031 316 ntBASIC17.8■□□□□ 0.44
Abcf1Q6P542 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcf1Q6P542 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Gm11434-201ENSMUST00000122379 629 ntBASIC17.79■□□□□ 0.44
Abcf1Q6P542 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Abcf1Q6P542 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcf1Q6P542 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms