Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Dio3-201ENSMUST00000097228 1449 ntBASIC13.3□□□□□ -0.28
Commd3Q63829 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Commd3Q63829 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Commd3Q63829 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.29□□□□□ -0.28
Commd3Q63829 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Commd3Q63829 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Commd3Q63829 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.29□□□□□ -0.28
Commd3Q63829 Gm18958-201ENSMUST00000174258 762 ntBASIC13.29□□□□□ -0.28
Commd3Q63829 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.29□□□□□ -0.28
Commd3Q63829 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Commd3Q63829 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Commd3Q63829 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Gm11249-201ENSMUST00000117071 859 ntBASIC13.28□□□□□ -0.28
Commd3Q63829 Gm13158-201ENSMUST00000122007 736 ntBASIC13.28□□□□□ -0.28
Commd3Q63829 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.28□□□□□ -0.28
Commd3Q63829 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Gm37292-201ENSMUST00000192062 758 ntBASIC13.28□□□□□ -0.28
Commd3Q63829 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.28□□□□□ -0.28
Commd3Q63829 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.28□□□□□ -0.28
Commd3Q63829 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Commd3Q63829 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Commd3Q63829 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Commd3Q63829 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Commd3Q63829 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Gm12896-201ENSMUST00000118430 226 ntBASIC13.27□□□□□ -0.29
Commd3Q63829 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.27□□□□□ -0.29
Commd3Q63829 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Commd3Q63829 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Commd3Q63829 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Commd3Q63829 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.27□□□□□ -0.29
Commd3Q63829 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Commd3Q63829 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Commd3Q63829 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms