Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne1Q61457 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne1Q61457 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne1Q61457 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne1Q61457 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccne1Q61457 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccne1Q61457 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ccne1Q61457 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ccne1Q61457 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ccne1Q61457 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.6■□□□□ 0.89
Ccne1Q61457 Gm17271-201ENSMUST00000165535 355 ntBASIC20.6■□□□□ 0.89
Ccne1Q61457 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccne1Q61457 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.6■□□□□ 0.89
Ccne1Q61457 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccne1Q61457 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.6■□□□□ 0.89
Ccne1Q61457 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.59■□□□□ 0.89
Ccne1Q61457 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Ccne1Q61457 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccne1Q61457 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.58■□□□□ 0.89
Ccne1Q61457 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.58■□□□□ 0.89
Ccne1Q61457 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ccne1Q61457 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ccne1Q61457 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.58■□□□□ 0.88
Ccne1Q61457 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.57■□□□□ 0.88
Ccne1Q61457 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.57■□□□□ 0.88
Ccne1Q61457 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.57■□□□□ 0.88
Ccne1Q61457 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ccne1Q61457 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ccne1Q61457 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccne1Q61457 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ccne1Q61457 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms