Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Phf7-203ENSMUST00000226565 1971 ntBASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.4□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Trmt13-210ENSMUST00000198454 880 ntBASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm44450-201ENSMUST00000199528 114 ntBASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav15-1-dv6-1Q5R1D2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms