Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-3Q5R1C3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Gm7291-201ENSMUST00000199147 382 ntBASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-3Q5R1C3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Rab3c-203ENSMUST00000224180 967 ntBASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-3Q5R1C3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Gm11643-201ENSMUST00000119578 864 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Gm12134-201ENSMUST00000122109 520 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Mir5133-201ENSMUST00000174955 77 ntBASIC11.96□□□□□ -0.49
Trav3-3Q5R1C3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms