Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.11■□□□□ 0.17
Cdh6P97326 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.11■□□□□ 0.17
Cdh6P97326 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.11■□□□□ 0.17
Cdh6P97326 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdh6P97326 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.11■□□□□ 0.17
Cdh6P97326 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.11■□□□□ 0.17
Cdh6P97326 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Cdh6P97326 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh6P97326 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cdh6P97326 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh6P97326 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh6P97326 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.1■□□□□ 0.17
Cdh6P97326 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh6P97326 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.1■□□□□ 0.17
Cdh6P97326 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdh6P97326 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cdh6P97326 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.1■□□□□ 0.17
Cdh6P97326 Gm25745-201ENSMUST00000174945 133 ntBASIC16.1■□□□□ 0.17
Cdh6P97326 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh6P97326 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cdh6P97326 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh6P97326 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh6P97326 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdh6P97326 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh6P97326 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cdh6P97326 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cdh6P97326 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cdh6P97326 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.09■□□□□ 0.17
Cdh6P97326 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh6P97326 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cdh6P97326 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh6P97326 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdh6P97326 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cdh6P97326 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh6P97326 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh6P97326 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.08■□□□□ 0.17
Cdh6P97326 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdh6P97326 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cdh6P97326 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.08■□□□□ 0.16
Cdh6P97326 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Cdh6P97326 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cdh6P97326 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cdh6P97326 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Cdh6P97326 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cdh6P97326 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdh6P97326 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms