Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm2651-201ENSMUST00000203560 838 ntBASIC15.58■□□□□ 0.08
Lhx1P63006 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Lhx1P63006 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.58■□□□□ 0.08
Lhx1P63006 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.58■□□□□ 0.08
Lhx1P63006 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.58■□□□□ 0.08
Lhx1P63006 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Lhx1P63006 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx1P63006 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.57■□□□□ 0.08
Lhx1P63006 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Lhx1P63006 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.57■□□□□ 0.08
Lhx1P63006 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.57■□□□□ 0.08
Lhx1P63006 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.57■□□□□ 0.08
Lhx1P63006 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Lhx1P63006 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.57■□□□□ 0.08
Lhx1P63006 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lhx1P63006 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx1P63006 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gm7222-201ENSMUST00000117512 906 ntBASIC15.56■□□□□ 0.08
Lhx1P63006 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.56■□□□□ 0.08
Lhx1P63006 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.56■□□□□ 0.08
Lhx1P63006 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Lhx1P63006 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lhx1P63006 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.56■□□□□ 0.08
Lhx1P63006 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.56■□□□□ 0.08
Lhx1P63006 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx1P63006 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Lhx1P63006 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lhx1P63006 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Lhx1P63006 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Lhx1P63006 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Lhx1P63006 Gm15173-201ENSMUST00000122049 433 ntBASIC15.55■□□□□ 0.08
Lhx1P63006 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Lhx1P63006 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Mir5131-201ENSMUST00000175426 93 ntBASIC15.55■□□□□ 0.08
Lhx1P63006 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.55■□□□□ 0.08
Lhx1P63006 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
Lhx1P63006 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx1P63006 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms