Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.44□□□□□ -0.9
Rps28P62858 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Rps28P62858 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Rps28P62858 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Rps28P62858 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Rps28P62858 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.43□□□□□ -0.9
Rps28P62858 Pck2-205ENSMUST00000226352 2784 ntBASIC9.43□□□□□ -0.9
Rps28P62858 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Rps28P62858 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Rps28P62858 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Rps28P62858 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Rps28P62858 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Rps28P62858 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Gm7049-201ENSMUST00000223520 1712 ntBASIC9.42□□□□□ -0.9
Rps28P62858 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Rps28P62858 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.42□□□□□ -0.9
Rps28P62858 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Rps28P62858 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Rps28P62858 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Rps28P62858 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms