Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ctdsp1P58466 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ctdsp1P58466 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Mir6349-201ENSMUST00000184059 97 ntBASIC12.46□□□□□ -0.41
Ctdsp1P58466 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.46□□□□□ -0.41
Ctdsp1P58466 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.46□□□□□ -0.41
Ctdsp1P58466 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.46□□□□□ -0.41
Ctdsp1P58466 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.46□□□□□ -0.41
Ctdsp1P58466 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Flg-201ENSMUST00000050758 1488 ntBASIC12.46□□□□□ -0.42
Ctdsp1P58466 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ctdsp1P58466 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.45□□□□□ -0.42
Ctdsp1P58466 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.45□□□□□ -0.42
Ctdsp1P58466 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms