Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm24589-201ENSMUST00000116692 94 ntBASIC14.23□□□□□ -0.13
Cldn18P56857 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.23□□□□□ -0.13
Cldn18P56857 Gm4459-201ENSMUST00000118750 468 ntBASIC14.23□□□□□ -0.13
Cldn18P56857 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn18P56857 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn18P56857 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.23□□□□□ -0.13
Cldn18P56857 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cldn18P56857 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn18P56857 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Cldn18P56857 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn18P56857 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Gm12497-201ENSMUST00000138778 237 ntBASIC14.22□□□□□ -0.13
Cldn18P56857 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.22□□□□□ -0.13
Cldn18P56857 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.22□□□□□ -0.13
Cldn18P56857 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn18P56857 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.22□□□□□ -0.13
Cldn18P56857 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.22□□□□□ -0.13
Cldn18P56857 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cldn18P56857 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.22□□□□□ -0.13
Cldn18P56857 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn18P56857 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.22□□□□□ -0.13
Cldn18P56857 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn18P56857 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Cldn18P56857 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.21□□□□□ -0.13
Cldn18P56857 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm8825-201ENSMUST00000182565 998 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm4518-201ENSMUST00000182638 718 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm27459-201ENSMUST00000184860 107 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.21□□□□□ -0.13
Cldn18P56857 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cldn18P56857 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cldn18P56857 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn18P56857 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn18P56857 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn18P56857 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cldn18P56857 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn18P56857 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.21□□□□□ -0.14
Cldn18P56857 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cldn18P56857 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cldn18P56857 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn18P56857 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cldn18P56857 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.2□□□□□ -0.14
Cldn18P56857 Gm43347-201ENSMUST00000200226 580 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms