Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox1P53783 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.21■□□□□ 0.19
Sox1P53783 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox1P53783 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Sox1P53783 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.21■□□□□ 0.19
Sox1P53783 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Sox1P53783 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox1P53783 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Sox1P53783 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sox1P53783 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Sox1P53783 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Sox1P53783 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sox1P53783 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Sox1P53783 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sox1P53783 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox1P53783 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.2■□□□□ 0.18
Sox1P53783 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Sox1P53783 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sox1P53783 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox1P53783 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sox1P53783 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox1P53783 Gm9385-201ENSMUST00000117563 472 ntBASIC16.19■□□□□ 0.18
Sox1P53783 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox1P53783 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.19■□□□□ 0.18
Sox1P53783 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.19■□□□□ 0.18
Sox1P53783 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.19■□□□□ 0.18
Sox1P53783 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Sox1P53783 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sox1P53783 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sox1P53783 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sox1P53783 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox1P53783 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox1P53783 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox1P53783 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox1P53783 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.18■□□□□ 0.18
Sox1P53783 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox1P53783 Gm43630-201ENSMUST00000201550 776 ntBASIC16.18■□□□□ 0.18
Sox1P53783 Gm18057-201ENSMUST00000208220 503 ntBASIC16.18■□□□□ 0.18
Sox1P53783 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.18■□□□□ 0.18
Sox1P53783 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox1P53783 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox1P53783 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sox1P53783 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox1P53783 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox1P53783 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox1P53783 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms